This decadent Pecan Pie Cheesecake brings together a buttery graham cracker crust, a silky vanilla cheesecake spiked with a touch of cinnamon and nutmeg, and a sticky, toasted pecan pie topping finished with a scatter of sea salt flakes. The contrast of creamy filling, crisp crust, and crunchy pecans creates a truly indulgent dessert perfect for holidays or any special occasion.

Pecans—whether toasted, chopped, or candied—add warm, nutty depth to desserts, and they’re one of my favorite ingredients. I often use them in classic recipes such as chocolate pecan pie, salted pecan brownies, and sticky buns. This Pecan Pie Cheesecake takes that same comforting flavor and pairs it with a smooth cheesecake base for a show-stopping result.
This recipe makes an easy-to-prepare 9-inch cheesecake that literally combines two favorites in one. The cheesecake is ultra-smooth and creamy, while the pecan pie topping adds a rich caramel-like sweetness and crunchy texture. A light sprinkle of flaky sea salt enhances the flavors and balances the sweetness.
Table of Contents
- Ingredients
- How to Make the Recipe
- Recipe FAQs
- More Delicious Cheesecake Recipes
- Pecan Pie Cheesecake Recipe
Ingredients
The image below shows the ingredients for this homemade pecan pie cheesecake. Key items and substitutions are noted where helpful.

- Cream Cheese. Use full-fat cream cheese, preferably the block style, for the best texture.
- Pecans. Chop most pecans but leave a few larger pieces for texture. Toasting the pecans before adding them to the topping intensifies their flavor.
- Sour Cream. Full-fat sour cream gives the creamiest result. You can substitute whole-milk ricotta or plain Greek yogurt 1:1 if needed.
- Vanilla Bean Paste. This gives tiny vanilla flecks and a rich flavor; regular vanilla extract can be used as a 1:1 substitute.
For exact quantities and full instructions, see the recipe card below.
How to Make the Recipe
Below is a concise overview of the process. The full printable recipe in either US customary or metric units is in the recipe card.
Quick Tip: After greasing a 9-inch springform pan with a flour-based baking spray or butter, wrap the bottom and sides in several layers of heavy-duty aluminum foil to protect against the water bath. Alternatively, line the pan with parchment.
Graham Cracker Crust

Step 1: Pulse graham crackers in a food processor until they become fine crumbs. Work in batches if necessary.

Step 2: Add melted butter and granulated sugar; pulse until the mixture resembles wet sand.

Step 3: Press the crumbs firmly into the bottom (and a little up the sides, if desired) of the prepared springform pan. Bake at 325ºF for 8–10 minutes, then let cool slightly.
Quick Tip: After the crust has cooled a bit, add an oven bag or slow cooker liner around the outside of the pan as an extra moisture barrier during the water bath.
Cheesecake Batter

Step 1: Beat room-temperature cream cheese on medium-high until smooth and fluffy. Add sour cream, both sugars, cinnamon, nutmeg, and vanilla until blended.

Step 2: With the mixer on low, add eggs one at a time, mixing until just combined. Do not overmix.

Step 3: Pour the batter into the prepared crust. Place the springform pan in a large roasting pan and carefully add boiling water until it reaches about halfway up the sides of the springform pan. Alternatively, set the pan in the oven first and then pour in the hot water.

Step 4: Bake at 325ºF for 55–60 minutes, until the center still has a slight jiggle. Turn the oven off and let the cheesecake cool inside the closed oven for 45 minutes. Remove, cool to room temperature, then loosely cover and refrigerate for at least 4 hours or overnight before removing the springform ring.
Pecan Pie Topping

Step 1: Toast chopped pecans on a baking sheet at 300ºF for about 8–10 minutes until fragrant, then set aside to cool.

Step 2: In a medium saucepan, melt unsalted butter. Stir in granulated and brown sugars, heavy cream, light corn syrup, and vanilla until combined and starting to simmer.

Step 3: Add the toasted pecans, bring briefly to a boil, then simmer 2–3 minutes. Remove from heat and let the topping thicken as it cools.

Step 4: Spread the cooled or slightly warm topping over the chilled cheesecake. Sprinkle with sea salt flakes to finish. Any leftover topping keeps in the refrigerator for a day or two; reheat briefly before using.

Recipe FAQs
Yes. A water bath prevents drying, sinking, and cracking by creating a gentle, moist baking environment that helps the cheesecake cook evenly.
Yes. Make the topping up to two days ahead and store it in a sealed container in the fridge. Reheat for 30–45 seconds before spreading.
Stored tightly covered, leftover cheesecake keeps about 2–3 days refrigerated.
Yes. Freeze whole or sliced cheesecake after chilling. Double-wrap in plastic and foil; it keeps for up to a month. Thaw in the refrigerator overnight before serving.
More Delicious Cheesecake Recipes
Craving more cheesecake? Try other favorite recipes for lemon cheesecake, blueberry swirl bars, s’mores cheesecake, or chocolate brownie cheesecake for more inspiration.

Lemon Cheesecake

Blueberry Swirl Cheesecake Bars

S’mores Cheesecake

Chocolate Brownie Cheesecake
If you try this Pecan Pie Cheesecake, please leave a star rating and share your thoughts in the comments. Enjoy!
Pecan Pie Cheesecake

Equipment
- 9 inch Springform Pan
- Mixer (stand or hand)
- Mixing Bowls
- Spatulas
- Roasting Pan
- Parchment Paper (optional)
- Baking Spray
- Heavy Duty Aluminum Foil
- Oven Bag or Slow Cooker Liner (optional)
Ingredients
Graham Cracker Crust
- 2 ½ cups Graham Cracker Crumbs (about 18 full sheets)
- 1/4 cup Granulated Sugar
- 6 tbsp Unsalted Butter, melted
Cheesecake
- 24 oz Full-Fat Cream Cheese, softened to room temperature
- 1/2 cup Granulated Sugar
- 1/2 cup Light Brown Sugar, lightly packed
- 3/4 cup Full-Fat Sour Cream, room temperature
- 2 tsp Vanilla Bean Paste or vanilla extract
- 1/4 tsp Ground Cinnamon
- 1/8 tsp Ground Nutmeg
- 3 Large Eggs, room temperature
Pecan Pie Topping
- 2 cups Pecans, chopped
- 1/2 cup Unsalted Butter
- 1/2 cup Granulated Sugar
- 1/2 cup Light Brown Sugar, lightly packed
- 2 tbsp Light Corn Syrup
- 1/2 cup Heavy Cream
- 2 tsp Vanilla Extract
- Sea Salt Flakes, for garnish
Instructions
Graham Cracker Crust
- Preheat oven to 325ºF and position rack in the center.
- Grease a 9-inch springform pan and wrap the bottom and sides with 5–6 layers of heavy foil. (Optional: add an oven bag or slow cooker liner later for extra protection.)
- Pulse graham crackers to fine crumbs, mix with sugar and melted butter until combined. Press into the pan and bake 8–10 minutes. Cool slightly.
Cheesecake
- Beat cream cheese on medium-high until light and fluffy. Add sour cream, sugars, spices, and vanilla; mix until smooth.
- With the mixer on low, add eggs one at a time, mixing just until incorporated. Scrape the bowl as needed.
- Pour batter into crust, place the springform pan inside a roasting pan, and carefully add boiling water until it reaches about halfway up the sides of the springform pan.
- Bake 55–60 minutes at 325ºF until the center is slightly jiggly. Turn off the oven and keep the door closed; let the cheesecake cool in the oven for 45 minutes.
- Remove from oven, discard the outer foil/liner, cool to room temperature, then refrigerate loosely covered for at least 4 hours or overnight.
Salted Pecan Pie Topping
- Preheat oven to 325ºF and toast pecans for 8–10 minutes. Set aside.
- In a saucepan over medium heat, melt butter and stir in sugars, heavy cream, corn syrup, and vanilla. Bring to a simmer.
- Add toasted pecans, simmer 2–3 minutes, then remove from heat and let cool to thicken.
- Spread the topping over the chilled cheesecake and finish with sea salt flakes. Store leftovers covered in the refrigerator for 2–3 days.
Video
Notes
Don’t skip the water bath. The steam keeps the cheesecake moist and prevents cracks and sinking.
Protect the pan. Wrap the springform with several layers of foil and consider an oven bag or slow cooker liner for added protection against leaks.
Keep the oven door closed. Leaving the door shut while the cheesecake cools in the oven helps prevent sudden temperature changes that can cause cracks.
Nutrition
Nutritional information is an estimate and will vary based on exact ingredients used.